4.   Mitochondrial Dysfunction:  The mitochondria are the energy producing organelles in each cell of the body.  They are extremely key in the bodies ability to handle oxidative stress.  Dysfunction in the mitochondria leads to increased free radical and oxidative stress which creates immune alterations.  This is a classic sign in Hashimoto’s autoimmune pathophysiology (22).
These individuals very often have intestinal permeability and dysbiosis so the heavy proteins can be challenging on their digestive system. Eggs are also one that many people in this category have a sensitivity too. I get them doing just small amounts of proteins and loading up on anti-oxidant rich vegetables and herbs and good fats like coconut oil/butter, etc.
Hypothyroidism (overactive thyroid) is a condition in which the thyroid gland produces an abnormally low amount of thyroid hormone. Many disorders result in hypothyroidism, which may directly or indirectly involve the thyroid gland. Because thyroid hormone affects growth, development, and many cellular processes, inadequate thyroid hormone has widespread consequences for the body.
Fruits and veggies - Colorful foods like berries, grapes, dark leafy greens, and most other fruits and vegetables are high in healthy antioxidants, which helps your body build up its immune system and stave off unwanted diseases. Given that hypothyroidism is often a consequence of autoimmune diseases, building up that immune system is key to helping prevent your hypothyroidism from progressing.

Brazil nuts are packed with another nutrient that helps regulate thyroid hormones: selenium. In one 2003 study by researchers in France, women who consumed higher amounts of selenium were less likely to develop goiters and thyroid tissue damage than those who didn't. Plus, it may also help stave off long-term thyroid damage in people with thyroid-related problems like Hashimoto's and Graves' disease, according to a 2013 review in the journal Clinical Endocrinology.

On the flip side, there are certain foods that people with underactive thyroids should minimize or avoid altogether, like cruciferous vegetables, particular raw Brassica vegetables like broccoli, cauliflower, cabbage, kale, soy, and Brussels sprouts. While these are healthy foods for most people, they contain a compound called goitrogens, which might impact thyroid function by impairing thyroid peroxidase. Gluten, conventional dairy, refined sugar and refined flour, caffeine and alcohol (which stress your adrenals) are also contraindicated for hypothyroid patients.
I suspect that there is actually enough iodine in the environment to go around, and that we actually need less than 150 micrograms per day of iodine.  From the above list, you can see that animal foods are much richer in iodine than plant foods—so how do herbivores (animals which eat a plant-based diet, such as rabbits and deer) get enough iodine?  I suspect that there is something about the human diet which interferes with our ability to absorb, utilize, and/or retain iodine, and that this is why we appear to be iodine-deficient compared to other animals.  So, what might the possible culprits be?   Hmmm….
The foods listed above do not contain any thiocyanate when they are in their living, intact state, because thiocyanates do not form until the plant is cut, crushed, or chewed.   For example, fresh broccoli contains a harmless substance called glucosinolate, which turns into a thiocyanate called sulforaphane when the vegetable is damaged (see my broccoli blogpost for more information).
11.  Methylation:  Methylation is a key process that protects DNA, turns on and off genetic traits and helps to detoxify environmental chemicals.  Many individuals have certain genetic polymorphisms that limit their ability to appropriately methylate. Methylation plays a very important role in T cell function and poor methylation status is associated with the development of auto-immunity (31).
Symptoms - Hypothyroidism doesn’t have any unique characteristic symptoms - all of its symptoms could potentially present as symptoms of a different illness. One way to differentiate whether your symptoms are a product of hypothyroidism is to consider whether you’ve always had the symptoms (in which case hypothyroidism in unlikely) or whether the symptom is a departure from the way you used to feel (which means hypothyroidism is more likely).
If you do choose to eat gluten, be sure to choose whole-grains varieties of bread, pasta, and rice, which are high in fiber and other nutrients and can help improve bowel irregularity, a common symptom of hypothyroidism. Also be sure to take your hypothyroidism medication several hours before or after eating high-fiber foods, to prevent them from interfering with the absorption of your synthetic thyroid hormone.

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